Changes in version 1.2.2 (2026-04-28)                  

  - Reduced installed package size by (i) removing prebuilt vignette
    artifacts from the source package, (ii) replacing large inst/extdata
    files with compressed xz data.
  - Improved vignette compliance with CRAN policies by removing the
    BiocStyle dependency.

                 Changes in version 1.2.1 (2024-01-26)                  

  - Updated plotDataTemporalMap function to conform to new
    specifications of the order() function to avoid possible warning or
    error when plotting character or factor data in alphabetical order.

                 Changes in version 1.2.0 (2023-12-17)                  

  - Updated to R 4.3.0.
  - Fixed CRAN requirement to message when used Internet resources are
    not available or have changed.
  - Use of inherits() to replace conditions comparing class() to string.

                 Changes in version 1.1.4 (2021-05-31)                  

  - Added time series plot as an alternative to heat map. This can be
    selected in the plotDataTemporalMap function using the new mode
    parameter.

                        Changes in version 1.1.3                        

  - Fixed issue when a numerical input column has all its values as
    missing.
  - Fixed issue when showing warning at kernel density estimation with
    less than 4 values.
  - Added help to IGTProjection class.

                 Changes in version 1.1.2 (2020-10-08)                  

  - Added webshot package to suggest list in DESCRIPTION to avoid
    Vignette compilation issues.

                 Changes in version 1.1.1 (2020-05-25)                  

  - Fixed issues when plotting IGT projections trajectories by filtering
    by date or at weekly period.

                 Changes in version 1.1.0 (2020-05-21)                  

  - Added function estimateIGTTrajectory to estimate a trajectory of the
    information temporal evolution in a IGT projection by fitting a
    cubic smoothing spline.
  - The plotIGTProjection function now allows plotting the information
    trajectory using the optional trajectory parameter.
  - Updated the estimateIGTProjection function to allow non-metric
    multidimensional scaling in addition to classical. To do so use the
    new embeddingType function parameter.
  - The dimensionality reduction loss for both non-metric (stress) and
    metric (1-GOF) multidimensional scaling is now returned by the
    estimateIGTProjection function.
  - The vignette has been extended to describe how to interpret temporal
    changes in IGT projections. This included how to use clustering
    methods in IGT projections to help delineate temporal subgroups.
    Other updates related to this version were included too.
  - Fixed warning in icd9toPheWAS when the input ICD-9 variable was a
    factor.
  - Fixed a typo and a warning in the vignette.

                 Changes in version 1.0.4 (2020-03-28)                  

  - Fixed bug in the estimateDataTemporalMap function where an expected
    Date was POSIXt instead when using newer versions of zoo and R
    package.

                 Changes in version 1.0.3 (2020-03-26)                  

  - Fixed bug when plotting IGT projections at a weekly period.
  - Removed no longer used plotly buttons to suppress warnings.

                 Changes in version 1.0.2 (2019-09-26)                  

  - Description texts, references and vignette have been fixed and
    updated.

                 Changes in version 1.0.1 (2019-06-11)                  

Bug fixes

  - Fixed help for the manual generation of a DataTemporalMap class
    using S4 new() constructor.
  - Removed unnecessary imports to reduce installation load.

                        Changes in version 1.0.0                        

  - Initial release.