Package: UpSetR 1.4.1

Nils Gehlenborg

UpSetR: A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets

Creates visualizations of intersecting sets using a novel matrix design, along with visualizations of several common set, element and attribute related tasks (Conway 2017) <doi:10.1093/bioinformatics/btx364>.

Authors:Jake Conway [aut], Nils Gehlenborg [aut, cre]

UpSetR_1.4.1.tar.gz
UpSetR_1.4.1.zip(r-4.7)UpSetR_1.4.1.zip(r-4.6)UpSetR_1.4.1.zip(r-4.5)
UpSetR_1.4.1.tgz(r-4.6-any)UpSetR_1.4.1.tgz(r-4.5-any)
UpSetR_1.4.1.tar.gz(r-4.7-any)UpSetR_1.4.1.tar.gz(r-4.6-any)
UpSetR_1.4.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
UpSetR/json (API)
NEWS

# Install 'UpSetR' in R:
install.packages('UpSetR', repos = c('https://hms-dbmi.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/hms-dbmi/upsetr/issues

On CRAN:

Conda:

ggplot2hidivelabupsetupsetrvisualization

15.56 score 829 stars 40 packages 5.8k scripts 32k downloads 319 mentions 7 exports 20 dependencies

Last updated from:d2dd1d9e9f. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK133
source / vignettesOK189
linux-release-x86_64OK169
macos-release-arm64OK84
macos-oldrel-arm64OK92
windows-develOK139
windows-releaseOK89
windows-oldrelOK84
wasm-releaseOK110

Exports:elementsfromExpressionfromListhistogramintersectsscatter_plotupset

Dependencies:clicpp11farverggplot2gluegridExtragtableisobandlabelinglifecycleplyrR6RColorBrewerRcpprlangS7scalesvctrsviridisLitewithr

Attribute Plots

Jake Conway and Nils Gehlenborg

Rendered fromattribute.plots.Rmdusingknitr::rmarkdownon May 20 2026.

Last update: 2016-10-17
Started: 2015-07-24

Basic Usage

Jake Conway and Nils Gehlenborg

Rendered frombasic.usage.Rmdusingknitr::rmarkdownon May 20 2026.

Last update: 2016-10-18
Started: 2015-07-24

Incorporating Set Metadata

Jake Conway and Nils Gehlenborg

Rendered fromset.metadata.plots.Rmdusingknitr::rmarkdownon May 20 2026.

Last update: 2016-10-17
Started: 2016-03-17

Querying the Data

Jake Conway and Nils Gehlenborg

Rendered fromqueries.Rmdusingknitr::rmarkdownon May 20 2026.

Last update: 2016-11-01
Started: 2015-07-24