Package: UpSetR 1.4.0

Jake Conway

UpSetR: A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets

Creates visualizations of intersecting sets using a novel matrix design, along with visualizations of several common set, element and attribute related tasks (Conway 2017) <doi:10.1093/bioinformatics/btx364>.

Authors:Jake Conway [cre], Nils Gehlenborg [aut]

UpSetR_1.4.0.tar.gz
UpSetR_1.4.0.zip(r-4.5)UpSetR_1.4.0.zip(r-4.4)UpSetR_1.4.0.zip(r-4.3)
UpSetR_1.4.0.tgz(r-4.4-any)UpSetR_1.4.0.tgz(r-4.3-any)
UpSetR_1.4.0.tar.gz(r-4.5-noble)UpSetR_1.4.0.tar.gz(r-4.4-noble)
UpSetR_1.4.0.tgz(r-4.4-emscripten)UpSetR_1.4.0.tgz(r-4.3-emscripten)
UpSetR.pdf |UpSetR.html✨
UpSetR/json (API)
NEWS

# Install 'UpSetR' in R:
install.packages('UpSetR', repos = c('https://hms-dbmi.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/hms-dbmi/upsetr/issues

On CRAN:

gehlenborglabggplot2upsetupsetrvisualization

15.22 score 760 stars 40 packages 4.4k scripts 21k downloads 319 mentions 7 exports 31 dependencies

Last updated 4 years agofrom:b14854a1b0. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 11 2024
R-4.5-winOKNov 11 2024
R-4.5-linuxOKNov 11 2024
R-4.4-winOKNov 11 2024
R-4.4-macOKNov 11 2024
R-4.3-winOKNov 11 2024
R-4.3-macOKNov 11 2024

Exports:elementsfromExpressionfromListhistogramintersectsscatter_plotupset

Dependencies:clicolorspacefansifarverggplot2gluegridExtragtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrR6RColorBrewerRcpprlangscalestibbleutf8vctrsviridisLitewithr

Attribute Plots

Jake Conway and Nils Gehlenborg

Rendered fromattribute.plots.Rmdusingknitr::rmarkdownon Nov 11 2024.

Last update: 2016-10-17
Started: 2015-07-24

Basic Usage

Jake Conway and Nils Gehlenborg

Rendered frombasic.usage.Rmdusingknitr::rmarkdownon Nov 11 2024.

Last update: 2016-10-18
Started: 2015-07-24

Incorporating Set Metadata

Jake Conway and Nils Gehlenborg

Rendered fromset.metadata.plots.Rmdusingknitr::rmarkdownon Nov 11 2024.

Last update: 2016-10-17
Started: 2016-03-17

Querying the Data

Jake Conway and Nils Gehlenborg

Rendered fromqueries.Rmdusingknitr::rmarkdownon Nov 11 2024.

Last update: 2016-11-01
Started: 2015-07-24