Package: UpSetR 1.4.0

Jake Conway

UpSetR: A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets

Creates visualizations of intersecting sets using a novel matrix design, along with visualizations of several common set, element and attribute related tasks (Conway 2017) <doi:10.1093/bioinformatics/btx364>.

Authors:Jake Conway [cre], Nils Gehlenborg [aut]

UpSetR_1.4.0.tar.gz
UpSetR_1.4.0.zip(r-4.5)UpSetR_1.4.0.zip(r-4.4)UpSetR_1.4.0.zip(r-4.3)
UpSetR_1.4.0.tgz(r-4.5-any)UpSetR_1.4.0.tgz(r-4.4-any)UpSetR_1.4.0.tgz(r-4.3-any)
UpSetR_1.4.0.tar.gz(r-4.5-noble)UpSetR_1.4.0.tar.gz(r-4.4-noble)
UpSetR_1.4.0.tgz(r-4.4-emscripten)UpSetR_1.4.0.tgz(r-4.3-emscripten)
UpSetR.pdf |UpSetR.html✨
UpSetR/json (API)
NEWS

# Install 'UpSetR' in R:
install.packages('UpSetR', repos = c('https://hms-dbmi.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/hms-dbmi/upsetr/issues

On CRAN:

gehlenborglabggplot2upsetupsetrvisualization

15.26 score 773 stars 41 packages 4.8k scripts 20k downloads 319 mentions 7 exports 31 dependencies

Last updated 4 years agofrom:b14854a1b0. Checks:8 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 09 2025
R-4.5-winOKFeb 09 2025
R-4.5-macOKFeb 09 2025
R-4.5-linuxOKFeb 09 2025
R-4.4-winOKFeb 09 2025
R-4.4-macOKFeb 09 2025
R-4.3-winOKFeb 09 2025
R-4.3-macOKFeb 09 2025

Exports:elementsfromExpressionfromListhistogramintersectsscatter_plotupset

Dependencies:clicolorspacefansifarverggplot2gluegridExtragtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrR6RColorBrewerRcpprlangscalestibbleutf8vctrsviridisLitewithr

Attribute Plots

Jake Conway and Nils Gehlenborg

Rendered fromattribute.plots.Rmdusingknitr::rmarkdownon Feb 09 2025.

Last update: 2016-10-17
Started: 2015-07-24

Basic Usage

Jake Conway and Nils Gehlenborg

Rendered frombasic.usage.Rmdusingknitr::rmarkdownon Feb 09 2025.

Last update: 2016-10-18
Started: 2015-07-24

Incorporating Set Metadata

Jake Conway and Nils Gehlenborg

Rendered fromset.metadata.plots.Rmdusingknitr::rmarkdownon Feb 09 2025.

Last update: 2016-10-17
Started: 2016-03-17

Querying the Data

Jake Conway and Nils Gehlenborg

Rendered fromqueries.Rmdusingknitr::rmarkdownon Feb 09 2025.

Last update: 2016-11-01
Started: 2015-07-24